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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3HA_GLOHA
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTIC LAVFPYQGSS IILESGNVND YEVVYPRKVP ALPKGAVQPK YEDAMQYEFK  60
   61 VNGEPVVLHL EKNKGLFSED YSETHYSPDG REITTNPPVE DHCYYHGRIQ NDADSTASIS 120
  121 ACNGLKGHFT LQGETYLIEP LKLPDSEAHA VFKYENVEKE DEAPKMCGVT QNWESYEPIK 180
  181 KASQSNLTPE QQRYLNAKKY VKLVMVADYI MYLKYDRNLT TVRTRMYDIV NVINVIYQRM 240
  241 NIHVALVGLE IWSNKDKFIL RSAADVTLKL FATWRETDLL KRKSHDNAQL LTGINFNGPT 300
  301 AGLGYLGGIC NPMYSAGIVQ DHNKIHHLVA IAMAHEMGHN LGIDHDKDTC TCGAKSCVMA 360
  361 GTLSCEASYL FSDCSRKEHQ AFLIKDMPQC ILKKPLKTDV VSPPVCGNYF VEVGEDCDCG 420
  421 SPATCRDSCC DAATCKLRQG AQCAEGLCCD QCRFKGAGTE CRAATDECDM ADLCTGRSAE 480
  481 CTDRFQRNGQ PCQNNNGYCY NGKCPIMTDQ CIALFGPNAA VSEDACFQFN LEGNHYGYCR 540
  541 KEQNTKIACE PQNVKCGRLY CIDSSPANKN PCNIYYSPGD EDKGMVLPGT KCADGKACSN 600
  601 GQCVDVNRAS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle