YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39777536
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHSTSHSA SSFLLIVSLA VLVIFTGNSS AKLSTNFYSK SCPKVFSTVQ SVVHSAVSKQ  60
   61 PRQGASLLRL HFHDCFVNGC DGSILLDDTP TFTGEKTARP NNGSIRAFEV VDEIKSKVEK 120
  121 ECPGVVSCAD ILAIAARDSV KILGGPKWDV KLGRRDSKTA SFSAANSGVI PPPTSTLGNL 180
  181 INRFKAKGLS TKDMVALSGA HTVGQARCTV FRDRIYKDKN IDSSFAKTRQ NKCPKTTGLP 240
  241 GDNKIAPLDL QTPTAFDNYY YKNLIKEKGL LRSDQQLFNG GSTDSLVKKY SQDTKTFYSD 300
  301 FVNAMIKMGD IQPLTGSSGE IRKNCRKVNN

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	330	0.99