YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39777532
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSTSHSA SSFLLIVSLA VLVIFSGNSS AKLSTNFYYK SCPKVFSTVQ SVVHSAISKQ  60
   61 PRQGASLLRL HFHDCFVNGC DGSVLLDDTP TFTGEKTAGP NKGSIRGFEF VDEIKSKVEK 120
  121 ECPGVVSCAD ILAIAARDSV KILGGPKWDV KLGRRDSKTA SLKAANSGVI PPPTSTLSNL 180
  181 INRFKAKGLS TKDMVALSGA HTIGQARCTV FRDRIYKDKN IDSSFAKTRQ NTCPKTTGLP 240
  241 GDNKIAPLDL QTPTAFDNYY YKNLIKQKGL LRSDQQLFNG GSTDSLVKKY SQDTKSFYSD 300
  301 FVNAMIKMGD IQPLTGSSGE IRKNCRKVNH

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	330	0.99