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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13548689
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAFLSFFVV FGFATTVSCR GDLVLSERAK QLPPVCASEI YCHGTFLHTI QMAGLFRDSK  60
   61 TFVDKKLKIN PEEVLASFEV LMNSTDQNPS RDQLAAFINL HFEPEGSEFE EWDPIDWHSN 120
  121 PSFLDGIRDT NLKIWGNSLH EAWTWLGRKI RDDVRINPQL YSMMYLPNPF IIPGGRFRET 180
  181 YYWDSYWIIK GLLISGMHET VKGMLLNFLL MVDTIGLVPN GGRIYYEKRS QPPLLTPMVE 240
  241 LYVNATGDIE FLKQNIHLLE KEMDFWLQER TVNVDGHRLI RYDVKVGGPR PESYKEDIEA 300
  301 IHHNPDLEAQ LDFYMNIAAG AETGWDFSSR WYWNGDIQTN LSHVRTRDIL PVDLNSFIAW 360
  361 DFDIMSRFEK QLGRDNASVV YSDLYSEWKT SINAILWDDE AGSWFDYDSA HRRWNTNFYV 420
  421 SNLTPLFVGC YDPKTVHHED VATRVLDYLE KSNALKFPGG VPTSLMQTSQ QWDFPNGWPP 480
  481 LQHMLVMGLD KTGDPRAKEL AFDVAQRWVF NNYEAFTQSL PNAMFEKYDV TVVGLPGGGG 540
  541 EYDVQLGFGW TNGVVMDFLV KYGERLTSVR DAKQLIWSPS SVSVGVGAGA TFLGAWIGLA 600
  601 STRFYRQLFK SDHKMGGIHG VAEAIQGLIA CVGSLLVATA ALFSEKDTTK RPTSGQTPQS 660
  661 SPIRRTKSLP GFLLFQRGSK GDEEHLLRNR AISEECSYSS IEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle