YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26327421
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAFPSSVQI GGLFIRNTDQ EYTAFRLAIF LHNTSPNASE APFNLVPHVD NIETANSFAV  60
   61 TNAFCSQYSR GVFAIFGLYD KRSVHTLTSF CSALHISLIT PSFPTEGESQ FVLQLRPSLR 120
  121 GALLSLLDHY EWNCFVFLYD TDRGYSILQA IMEKAGQNGW HVSAICVENF NDVSYRQLLE 180
  181 ELDRRQEKKF VIDCEIERLQ NILEQIVSVG KHVKGYHYII ANLGFKDISL ERFIHGGANV 240
  241 TGFQLVDFNT PMVTKLMDRW KKLDQREYPG SETPPKYTSA LTYDGVLVMA ETFRSLRRQK 300
  301 IDISRRGNAG DCLANPAAPW GQGIDMERTL KQVRIQGLTG NVQFDHYGRR VNYTMDVFEL 360
  361 KSTGPRKVGY WNDMDKLVLI QDAPTLGNDT AAIENRTVVV TTIMESPYVM YKKNHEMFEG 420
  421 NDKYEGYCVD LASEIAKHIG IKYKIAIVPD GKYGARDADT KIWNGMVGEL VYGKAEIAIA 480
  481 PLTITLVREE VIDFSKPFMS LGISIMIKKP QKSKPGVFSF LDPLAYEIWM CIVFAYIGVS 540
  541 VVLFLVSRFS PYEWHTEEPE DGKEGPSDQP PNEFGIFNSL WFSLGAFMQQ GCDISPRSLS 600
  601 GRIVGGVWWF FTLIIISSYT ANLAAFLTVE RMVSPIESAE DLAKQTEIAY GTLDSGSTKE 660
  661 FFRRSKIAVY EKMWTYMRSA EPSVFTRTTA EGVARVRKSK GKFAFLLEST MNEYIEQRKP 720
  721 CDTMKVGGNL DSKGYGVATP KGSSLRTTVN LAVLKLSEAG VLDKLKNKWW YDKGECGPKD 780
  781 SGSKDKTSAL SLSNVAGVFY ILVGGLGLAM LVALIEFCYK SRAEAKRMKL TPDCPKAVHT 840
  841 GTAIRQSSGL AVIASDLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle