YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3043422
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSFSFWTL CLILASLVSS SFCAAPRKPV DVPFGRNYYP TWAFDHIKYF NGGSEIQLHL  60
   61 DKSTGTGFQS KGSYLFGHFS MNIKMVPGDS AGTVTAFYLS STNSEHDEID FEFLGNRTGQ 120
  121 PYILQTNVFT GGQGNKEQRI FLWFDPTKEF HRYSILWNMY QIVFFVDDVP IRVFKNSKDL 180
  181 GVKFPFDQPM KIYNSLWNAD DWATRGGLEK TDWSKAPFVA GYKSFHIDGC EASVNAKFCA 240
  241 TQGKRWWDQP EFRDLDAAQW RRLRWVRQKF TIYNYCTDRK RLPQIPPECT RDRDI

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	295	0.99