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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33340009
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMWTFLGRP ECILCLSSTL GVMAFLSNNQ LPRLNQSHLP PLWLLTRRVG LKVKDSQFTL  60
   61 EGFPFRIISG AIDYFRVPRQ NWRQSLRKMQ ACGFNTLTTH IPWNLHEPTM GRFQFIENMD 120
  121 LVAFITMASE TGLWVILCPG PYIGGDIDLG GLPSWLLRDP KMKLRTTYKG FTKAMNRYFN 180
  181 NLIPRIAQLQ YNKGGPIIAV QVENEYGSYY MDKKYMEYVK TALVSRGIDE LLMTADDGVS 240
  241 LRKGHLQNVL ATVRMKNINK ETYEDFKFIQ GRSPILMTVY TTNSFDTWGA LRQLGDPQML 300
  301 MKDVREIFNL GFSLNFYMFQ GGTNFGLIGG AQSAEGYTPV VTSYDYCALI PENGDYTPEY 360
  361 QEFQRFFHSV TDFSPLTRPK ATLTFAYQPL TLLYYMTLWE VLPYLVKTTK SSRPLSMEQL 420
  421 TVNGRSGQSF GYILYETTIF NGGLLTSRGH IQDWARVFLD KDYVGLLDRS NKELLLYKDL 480
  481 TKKTQTLRIL VENQGRLTSG QDMNKERKGL TGDIYLDKSP LRPFKIYSLE MGNVFIQREF 540
  541 PKYWKTATSP VMGPAFFLSH LKAGDPPQDT FIQVKDWGKG VIAINGRSLG RYWNIGPQET 600
  601 IFVPGSWLHP GVNTIIMFEE LKGGVKIHFT SRAHLGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle