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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33321253
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLRLIAGL RNASNTIRSQ AVYRSFSSLT KSPALIRNAT QILSKNKRAV VQVFTRTCFH  60
   61 PGASSQVPLA SGQLSGYQLV QRLLKFVWPK DKPEIKRRVL VALCLLIAAK LANVSVPFLL 120
  121 RDIVNYYNGK APEFLKLTFD GTPSQTIFTA GIATCIAYGI ARATASLFNE LRNAVFAKVA 180
  181 QNSIRSISRS IFLHLHSLDL SFHLNRQTGA LSKAIDRGTR GMSFVLSSLI FNLIPTAVEI 240
  241 GMVSALFTGT LGPEFAYMTM GSIGMYGIAT LGVTKWRTKF RHQMNQADND AGNKAIDSLI 300
  301 NYETVKYFNN EKFEADRYDH FLKKYEGASL KTTSSLALLN FTQNAIFSGA LIGVMCMAGT 360
  361 RIAAGDLTIG DLILANTLLF QLSIPLNFLG SVYREVRQGL VDMNQMFSLL TLKPKIVEAA 420
  421 DAKRLEIVDN DISLKFENVH FGYLPEKPIL KGLDLEIPVG KKVAIVGGSG SGKSTIVRLL 480
  481 YRLYDTESGN VRINGLETRD LTLDSLRQSI SIVPQDSVLF HDTIFYNLAY GRPSASMEEV 540
  541 YQAAKLADLH ESVLAMPQGY ETLVGERGLK LSGGEKQRVA IARAILKNAP FVIYDEATSS 600
  601 LDAITESNIM KALKGAVEKR TSLFIAHRLA TIVDADIIYV LQDGKVAEKG SHFDLLAVDG 660
  661 LYAQLWKSQN IHGVAPKKSK EEDDDLMLEL DLDKCCGSSS CNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle