YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27805187
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHSLRYFHT AVSRPGLREP RFIIVGYVDH TEFVRYDSDA ENPRYEPRAR WMEREGPEYW  60
   61 EQQTQIVKGH EWSFRVSLRN LLGYYNQSEG GSHTLQVMSG CDMGSDRSLR RGYEQYAYDG 120
  121 RDYISLNEDL KTWSAADLAA QITLNKWDQA GELDYYKAYL EGPCLEWLLR YLEHGKETLM 180
  181 RSDPPKAHVT LHPRPEGDVT LRCWALGFYP ADITLTWQLN EEDLTQDMEL VETRPAGDGT 240
  241 FQKWASVVVP PGKEQNYTCL VEHEGLPEPL TLRWEAPPST NSNTGMSVIL GTVTIIAVMA 300
  301 IIVVVAVIRT VVRKRWIKTG GEGGDYAPAP GRDSCQSSDV SLPDCKA

Type	Start	End	Confidence
Non-Cytoplasmic	1	287	0.98
Transmembrane Helix	288	308	0.97
Cytoplasmic	309	347	0.96