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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1665741
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQGCYTDC WGAIWWIWES GIKAMAGLEG EIQTRRLRGR EIPVLPPVTR SAAASAANVG  60
   61 YNENTRKTKV STKRAAADDT SSRVASNVPV QHAKKRAALA NLTNQSNSAI TRNSSLPSKS 120
  121 HASAVNGKTR AAAGQVKEVQ QVAQQVVEPL QEVGREPNTG RSSLANSSIT FDNDENACPE 180
  181 RATSSVGMKS RTLDVLQLVG NENKTVASLE RKTQHSLYIS KDTKPRARQG GLFEDCKDDN 240
  241 EEGGWSSKNY MDIDNHKDPQ MCSAYAAEIY HHLRMAELKR RPSLNFMDTV QQDINASMRG 300
  301 ILVDWLVEVA EEYKLVPDTL YLTISYIDRF LSGNLVTRQR LQLLGVASML IASKYEEICA 360
  361 PQVDEFCYIT DNTYNREEVL EMERSVLNHL HFELTGPTTK SFLRRFVRAA QAGQKSPTLQ 420
  421 LEFLGNYLAE LTLLEYGFLH FLPSMIAGAA VLVARVTLNP TWRPWNSTLQ HYSGYKASEL 480
  481 KECAKAILEL QKNTKNCTLP AIREKYRQHK FKCVATLHPP ASIPAEYFDD IE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle