YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6473968
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIFITFDIIA LILQAAGGGV AGGADSGSQL QTQGSQIMLG GICFQLFTIV VFSILFSIFF  60
   61 IALYTHHPIR PSTGRREPDV PYTRVRTMSC NCLALATFAM VVRSVYRVIE LAQGWEGAVI 120
  121 THEVWFDIFD FIPMIFTSAL LIPSLYPALE RSKLPFTEKH VSSMEYAPSE YGPSEYGPSI 180
  181 NDITNMSAVI YPDSFLAPKD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.70
Transmembrane Helix	8	27	0.81
Non-Cytoplasmic	28	41	0.81
Transmembrane Helix	42	66	0.89
Cytoplasmic	67	84	0.89
Transmembrane Helix	85	106	0.85
Non-Cytoplasmic	107	127	0.85
Transmembrane Helix	128	149	0.86
Cytoplasmic	150	200	0.96