YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6473492
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKVYLKTTLN RLYNSKLTRK VLYYLFSPLF TLELWKLRVR GALSKFPTNC LRSVYSHTVS  60
   61 LMKYLTSAVI SCWRIYLLIG ILAAITGTVV WRIRVYAKKH VVKHGVSVCV SHCIAKLQKT 120
  121 KLKSLTDFSV NPRVEVVQLR SDCFVSGVAD DKGLFELVHL PLSIQLEIWE KVVSVLEGMV 180
  181 SVKVWDSERL AKNRAWEWI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.84
Transmembrane Helix	21	39	0.71
Non-Cytoplasmic	40	71	0.84
Transmembrane Helix	72	93	0.87
Cytoplasmic	94	199	0.90