YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6473424
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YISEFVEEHS RLAKAFLCRL VYFIMAVMVF LVIFDGFPFW LSAFSIFSHY IYKINFDTFP  60
   61 FFSFKRMRFL LACFLIVANH ILWVRFFQVH EFPIKPRGLT YDFVGQRLLT SRASFSQVAS 120
  121 FMGVCVWSVP IGIFVSFTAA DNTLPTITTP SSSSPDAYSS GS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.90
Transmembrane Helix	20	41	0.91
Non-Cytoplasmic	42	66	0.89
Transmembrane Helix	67	87	0.93
Cytoplasmic	88	116	0.90
Transmembrane Helix	117	140	0.83
Non-Cytoplasmic	141	162	0.92