YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4586372
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPHFLVLIL YFLLFFIGGD AAVFTLKNKC NMKIWPGILS GGGHPLLMNG GLQLQPNETA  60
   61 EIKAPTGWSG RFWPRSQCNF DTSGKGTCAT ADCGGVLECN GAGGNPPASL AEFTLDSPMD 120
  121 FYDVSFVDGF NIPISIYPLG GSGNCSNVQC VSDLNLQCPP ELQVKTNNDT VIACKSACLA 180
  181 FNKPEYCCTE EFNDPNICKP TKYSEIFKKA CPDAYSYPYD DATSTFTCKG ADYLISFC

Type	Start	End	Confidence
Signal Peptide	1	21	0.88
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	238	0.92