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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|79382641, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQAGPQQ TCEFVSYKTL LISPSHLSRH LTTSLLSPLS PPWRDYSFPP MDLRRRPPKP  60
   61 PVTNNNNSNG SFRSYQPRTS DDDHRRRATT IAPPPKASDA LPLPLYLTNA VFFTLFFSVA 120
  121 YYLLHRWRDK IRYNTPLHVV TITELGAIIA LIASFIYLLG FFGIDFVQSF ISRASGDAWD 180
  181 LADTIDDDDH RLVTCSPPTP IVSVAKLPNP EPIVTESLPE EDEEIVKSVI DGVIPSYSLE 240
  241 SRLGDCKRAA SIRREALQRV TGRSIEGLPL DGFDYESILG QCCEMPVGYI QIPVGIAGPL 300
  301 LLDGYEYSVP MATTEGCLVA STNRGCKAMF ISGGATSTVL KDGMTRAPVV RFASARRASE 360
  361 LKFFLENPEN FDTLAVVFNR SSRFARLQSV KCTIAGKNAY VRFCCSTGDA MGMNMVSKGV 420
  421 QNVLEYLTDD FPDMDVIGIS GNFCSDKKPA AVNWIEGRGK SVVCEAVIRG EIVNKVLKTS 480
  481 VAALVELNML KNLAGSAVAG SLGGFNAHAS NIVSAVFIAT GQDPAQNVES SQCITMMEAI 540
  541 NDGKDIHISV TMPSIEVGTV GGGTQLASQS ACLNLLGVKG ASTESPGMNA RRLATIVAGA 600
  601 VLAGELSLMS AIAAGQLVRS HMKYNRSSRD ISGATTTTTT TT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle