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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHB_SOLTU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIENTRDSD SMRGSRVGFS GSLVSGKKSA RFKDDESYVE ITLDVRDDSV SVQNIKGADH  60
   61 EAALLASRLE KRPNNTLGSQ LSFHLRQVSK ELKRMTSSNK FQKIDRSKSG AARALRGLQF 120
  121 MNKNVGTEGW SEVESRFDQL AVNGMLTKSL FGQCIGMKES SEFAEELFDA LARKRCITSP 180
  181 AVTKDELREF WEQITDTSFD ARLQTFFDMV DKDADGRITQ EEVKEIISLS ASANKLSKIQ 240
  241 DNSDEYAALI MEELDPGNVG YIELYNLETL LLQAPSHSMN LSTNSRVLSR MLSQKLKPTK 300
  301 ERNPFKRCKR RLDYFIEDNW KRIWVMALWL SICAGLFTWK FIQYKRRAVF DVMGYCVSVA 360
  361 KGGAETTKFN MALVLLPVCR NTITWLRSRT KLGKIIPFDD NINFHKVIAF GIAVGVGLHA 420
  421 ISHLTCDFPR LLHATDEEYE PMKPFFGDER PNNYWWFVKG TEGWTGVVMV VLMIIAYVLA 480
  481 QPWFRRNRLN LPSTIKKLTG FNAFWYSHHL FVIVYVLFII HGYFLYLSKK WYKKTTWMYI 540
  541 AVPMILYACE RLLRAFRSGY KAVKILKVAV YPGNVMAVHM SKPQGFKYTS GQYIFVNCSD 600
  601 VSSFQWHPFT ISSAPGDDYL SMHIRTLGDW TSQLKTLFSK VCEPPTGDQS GLLRADVAKA 660
  661 DYKPRLPKLL IDGPYGAPAQ DYKKYDVVLL VGLGIGATPL ISIVKDVLNN IKQQKNIEDG 720
  721 TKGSKRSPFA TKRAYFYWVT REQGSFEWFK GVMDEVSEND QEGLIELHNY CTSVYEEGDA 780
  781 RSALITMLQS IQQAKSGVDI VSGTRVKTHF ARPNWRQVFK RVTINHPDQR IGVFYCGPQG 840
  841 LVGELRHLSQ DFSHKTGTKF EFHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle