YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|565094
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHQKLTFSW FAMVLLVSPL MAMWELEKDV YVVEVDWRPD APGETVTLTC DSPEEDDITW  60
   61 TSDQRRGVIG SGKTLTITVR EFLDAGQYTC HRGGETLSHS HLLLHKKENG IWSTEILKNF 120
  121 KNKTFLKREA PNYSGRFTCS WLVHRNTDLK FNIKSSSSSP ESRAVTCGAA SLSAEKVTLN 180
  181 QRDYEKYSVA CQEDVTCPTA EETLPIELVV EAQQQNKYEN YSTSFFIRDI IKPDPPKNLQ 240
  241 VKPLKNSQVE VSWEYPDSWS TPHSYFSL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	268	0.99