YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3759184
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSHFILKL FLVISFCNVC FASRKLTALV QEPENQLLQY HKGALLFGKI SVNLIWYGKF  60
   61 KPSQRAIVSD FITSLSSSTP SKTDPSVAKW WKTTEKYYHL ANSKKSLSLY LGKQVLVENY 120
  121 SLGKSLTQKQ IVQLASKGEQ KDAINIVLTA SDVAVDGFCV NRCGTHGSSK GAIIRGKTYK 180
  181 FAYIWVGNSE TQCAGYCAWP FHQPIYGPQS PPLVAPNNDV GVDGMVINLA SLLAGTATNP 240
  241 FGNGYYQGEA DAPLEAASAC PGVYAKGAYP GYAGDLLVDK TTGASYNAHG TNGRKYLLPA 300
  301 LYDPSTSTCS TLV

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	313	0.99