YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8096255
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSFLVLL LFALFAIPQG LANYEKPPVY TPPVYTPPIV KPPVYKPPVE KPPVYKPPVE  60
   61 KPPVYKPPVE KPPVYKPPVE KPPVYKPPVE KPPVYKPPVE KPPVYKPPVV KPPVYKPPVV 120
  121 KPPVYKPPVY KPPVVMPPVY KPPVYKPPVY KPPVVKPPVY KPPVYKPPVV KPPVYKPPVV 180
  181 KPPVYKPPVY KPPVVKPPVY KPPVYKPPVV KPPVYKPPVY KPPVVKPPIY KPPVVKPPVY 240
  241 KPPVEKPPVY KPPVYKPPVV KPPVYKPPVY KPPVVKPPVY KPPVEKPPVY KPPVEKPPVY 300
  301 KPPVEKPPVY KPPVEKPPVY KPPVEKPPVY EPPHHPKYPP AGL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	343	0.99