YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3036949
Protein type:	Globular with Signal Peptide
Type Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTMALSS SFAGKAVKLS PSSSEITGNG KVTMRKTASK AKPVSSGSLW YGPDRVKYLG  60
   61 PFSGESPSYL TGEFPGDYGW DTAGLSADPE TFAKNRELEV IHCRWAMLGA LGCVFPELLA 120
  121 RNGVKFGEAV WFKAGSQIFS EGGLDYLGNP SLVHAQSILA IWACQVILMG AVEGYRVAGG 180
  181 PLGEVVDPLY PGGSFDPLGL AEDPEAFAEL KVKEIKNGRL AMFSMFGFFV QAIVTGKGPL 240
  241 ENLADHLADP VNNNAWAYAT NFVPGK

Type	Start	End	Confidence
Signal Peptide	1	16	0.40
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	266	0.66