YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|556367
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTMALSS PSLAGQAVKL GSSVSNIVGE GRITMRKTAS KSKNVSSGSP WYGPDRVKYL  60
   61 GPFSGEAPSY LTGEFPGDYG WDTAGLSADP ETFAKNRELE VIHSRWAMLG ALGCVFPELL 120
  121 SRNGVKFGEA VWFKAGAQIF SEGGLDYLGN PSLVHAQSIL AIWATQVILM GAVEGYRVAG 180
  181 GPLGEITDPL YPGGSFDPLG LAEDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP 240
  241 IENLADHLAD PVNNNAWSYA TNFVPGK

Type	Start	End	Confidence
Signal Peptide	1	17	0.80
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.90