YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|555889
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLLGFICL IVPLLSLETD KCTEYPNEVI SFSSVNEIDI RSCPLTPNEM HGGTIIWYKN  60
   61 DSKTPISADK DSRIHQQNEH LWFVPAKMED SGYYYCIMRN STYCLKTKIT MSVLENDPGL 120
  121 CYNTQASFIQ RLHVAGDGSL VCPYLDFFKD ENNELPKVQW YKNCKPLPLD DGNFFGFKNK 180
  181 LMVMNVAEEH RGNYTCRTSY TYQGKQYPVT RVITFITIDD SKRDRPVIMS PRNETMEADP 240
  241 GSTIQLICNV TGQFTDLVYW KWNGSEIEWD DPILAEDYQL

Type	Start	End	Confidence
Signal Peptide	1	19	0.93
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	280	0.99