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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|212748
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPSQVLAC AILGLLYQHA SGGLIKRIIR QKRETGLNVT LPEDNQPVVF NHVYNIKLPV  60
   61 GSLCSVDLDT ASGDADLKAE IEPVKNYEEH TVNEGNQIVF THRINIPRRA CGCAAAPDIK 120
  121 DLLSRLEELE GLVSSLREQC ASGAGCCPNS QTAEGRLDTA PYCSGHGNYS TEICGCVCEP 180
  181 GWKGPNCSEP ACPRNCLNRG LCVRGKCICE EGFTGEDCSQ AACPSDCNDQ GKCVDGVCVC 240
  241 FEGYTGPDCG EELCPHGCGI HGRCVGGRCV CHEGFTGEDC NEPLCPNNCH NRGRCVDNEC 300
  301 VCDEGYTGED CGELICPNDC FDRGRCINGT CFCEEGYTGE DCGELTCPNN CNGNGRCENG 360
  361 LCVCHEGFVG DDCSQKRCPK DCNNRGHCVD GRCVCHEGYL GEDCGELRCP NDCHNRGRCI 420
  421 NGQCVCDEGF IGEDCGELRC PNDCHNRGRC VNGQCECHEG FIGEDCGELR CPNDCNSHGR 480
  481 CVNGQCVCDE GYTGEDCGEL RCPNDCHNRG RCVEGRCVCD NGFMGEDCGE LSCPNDCHQH 540
  541 GRCVDGRCVC HEGFTGEDCR ERSCPNDCNN VGRCVEGRCV CEEGYMGIDC SDVSPPTELT 600
  601 VTNVTDKTVN LEWKHENLVN EYLVTYVPTS SGGLDLQFTV PGNQTSATIH ELEPGVEYFI 660
  661 RVFAILKNKK SIPVSARVAT YLPAPEGLKF KSVRETSVQV EWDPLSISFD GWELVFRNMQ 720
  721 KKDDNGDITS SLKRPETSYM QPGLAPGQQY NVSLHIVKNN TRGPGLSRVI TTKLDAPSQI 780
  781 EAKDVTDTTA LITWSKPLAE IEGIELTYGP KDVPGDRTTI DLSEDENQYS IGNLRPHTEY 840
  841 EVTLISRRGD MESDPAKEVF VTDLDAPRNL KRVSQTDNSI TLEWKNSHAN IDNYRIKFAP 900
  901 ISGGDHTELT VPKGNQATTR ATLTGLRPGT EYGIGVTAVR QDRESAPATI NAGTDLDNPK 960
  961 DLEVSDPTET TLSLRWRRPV AKFDRYRLTY VSPSGKKNEM EIPVDSTSFI LRGLDAGTEY1020
 1021 TISLVAEKGR HKSKPTTIKG STAPKGISFS DITENSATVS WTPPRSRVDS YRVSYVPITG1080
 1081 GTPNVVTVDG SKTRTKLVKL VPGVDYNVNI ISVKGFEESE PISGILKTAL DSPSGLVVMN1140
 1141 ITDSEALATW QPAIAAVDNY IVSYSSEDEP EVTQMVSGNT VEYDLNGLRP ATEYTLRVHA1200
 1201 VKDAQKSETL STQFTTGLDA PKDLSATEVQ SETAVITWRP PRAPVTDYLL TYESIDGRVK1260
 1261 EVILDPETTS YTLTELSPST QYTVKLQALS RSMRSKMIQT VFTTTGLLYP YPKDCSQALL1320
 1321 NGEVTSGLYT IYLNGDRTQP LQVFCDMAED GGGWIVFLRR QNGKEDFYRN WKNYVAGFGD1380
 1381 PKDEFWIGLE NLHKISSQGQ YELRVDLRDR GETAYAVYDK FSVGDAKTRY RLRVDGYSGT1440
 1441 AGDSMTYHNG RSFSTFDKDN DSAITNCALS YKGAFWYKNC HRVNLMGRYG DNNHSQGVNW1500
 1501 FHWKGHEYSI QFAEMKLRPS SFRNLEGRRK RA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle