YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3986289
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRAHHFRRS LRSLLAHSHS HPHSNPHINP RLLCSLSSQP PSSDAEVRKY IGYTVLVLGC  60
   61 AAATYYSFPF PADAKHKKAQ LFRYAPLPDD LHTVTNWSGT HEVQTRTFLQ PESLQELEAA 120
  121 VKDSNEKKQK IRPVGSGLSP NGIGLTRAGM VNLGLMDKVL EVDKEKKRVT VQAGIRVQQL 180
  181 VDSIKEYGLT LQNFASIREQ QVGGIVQVGA HGTGARLPPI DEQVISMKLV TPAKGTIEIS 240
  241 KEKDPDLFYL ARCGLGGLGV VAEVTLQCVE RQELVEHTYI SNMKDIKKNH KKLLSENKHV 300
  301 KYLHIPYTDA VVVVTCNPIS KWKGPPKYKP KYSPEEAVGH VQDLYRESLK KYRSTENESE 360
  361 INELSFTELR DKLLALDPLN TDHVKKTNQA EAEFWRKSEG YRVGWSDEIL GFDCGGHQWV 420
  421 SETCFPAGTL SKPSMKDLEF IEQLMQLIEK ESIPAPAPIE QRWTACSKSL MSPAYSSVDD 480
  481 DIFSWVGIIM YLPTMDARER KHITEEFFHY RHLTQAHLWD HYSAYEHWAK IEVPKDKEEL 540
  541 QALQARLRKK FPVDAYNRAR QELDPNRILS NNMLEKLFPS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle