YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13603406
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTTTPSFQ IWRRFIAASP ITCPSSLSLV SVSKSPLLKS HRIAASLRCY SSSTRMGDAI  60
   61 ADANMDAVQR RLMFEDECIL VDENDRVVGH DTKYNCHLME KIEAENLLHR AFSVFLFNSK 120
  121 YELLLQQRSA TKVTFPLVWT NTCCSHPLYR DSELIEENAL GVRNAAQRKL LDELGIPAED 180
  181 VPVDQFTPLG RILYKAPSDG KWGEHELDYL LFTVREVNMK PNPDEVADVK YVNREQLKEL 240
  241 LRKADAGEGG LKLSPWFRLV VDNFLFKWWD HLEKGTLEEV IDMKTIHKLT

Type	Start	End	Confidence
Signal Peptide	1	28	0.73
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	290	0.97