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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8648059
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAMALSSTM ALSLPQSSMS LSHCRHNRIT ILIPSSSLRR RGGSSIRCST ISTSNSAAAA  60
   61 NYQNKNIGTN GVDGGGGGGG VLDCVIVGGG ISGLCIAQAL STKYSNLSTN FIVTEAKDRV 120
  121 GGNITTMEAD GYLWEEGPNS FQPSDAVLTM AVDSGLKEEL VLGDPNSPRF VLWNGKLRPV 180
  181 PSKLTDLPFF DLMSFPGKIR AGLGALGLRP SPPAHEESVE QFVRRNLGDE VFERLIEPFC 240
  241 SGVYAGDPSK LSMKAAFGRV WVLEQKGGSI IGGTLKTIQE RKDNPKPPRD PRLPKPKGQT 300
  301 VGSFRKGLSM LPTAISERLG NKVKVSWTLS GIAKSSNGEY NLTYETPDGL VSVRTKSVVM 360
  361 TVPSYVASSL LRPLSDVAAE SLSKFHYPPV AAVSLSYPKE AIRSECLIDG ELKGFGQLHS 420
  421 RSQGVETLGT IYSSSLFPGR APPGRTLILN YIGGDTNPGI LDKTKDELAE AVDRDLRRIL 480
  481 INPNAKAPRV LGVRVWPQAI PQFLIGHFDL LDAAKAALTD GGHKGLFLGG NYVSGVALGR 540
  541 CIEGAYESAA EVVDFLSQYS DK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle