YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4586308
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSATDDNP RSVKRVAVVG AGVSGLAAAY KLKSHGLDVT VFEAEGRAGG RLRSVSQDGL  60
   61 IWDEGANTMT ESEIEVKGLI DALGLQEKQQ FPISQHKRYI VKNGAPLLVP TNPAALLKSK 120
  121 LLSAQSKIHL IFEPFMWKRS DPSNVCDENS VESVGRFFER HFGKEVVDYL IDPFVGGTSA 180
  181 ADPESLSMRH SFPELWNLEK RFGSIIAGAL QSKLFAKREK TGENRTALRK NKHKRGSFSF 240
  241 QGGMQTLTDT LCKELGKDDL KLNEKVLTLA YGHDGSSSSQ NWSITSASNQ STQDVDAVIM 300
  301 TAPLYNVKDI KITKRGTPFP LNFLPEVSYV PISVMITTFK KENVKRPLEG FGVLVPSKEQ 360
  361 KNGLKTLGTL FSSMMFPDRA PSDLYLYTTF IGGTQNRELA QASTDELRKI VTSDLRKLLG 420
  421 AEGEPTFVNH FYWSKGFPLY GRNYGSVLQA IDKIEKDLPG FFFAGNYKGG LSVGKAIASG 480
  481 CKAADLVISY LNSASDNTVP DK

Type	Start	End	Confidence
Signal Peptide	1	28	0.51
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	502	0.99