YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6474173
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NCWVAMIKLL SRRISYKRSL IYSSFWILNP FVAIISTRGN CEAILGILSI ALLYLIEKKS  60
   61 VWLASLILGF SVHFKIYPFM YGIAFLVYFS KPKKGSTFME KFLSLLSINQ LKIVVGSLFM 120
  121 FTICNLLMYY LYGSPFLEHT YLYHFGRTD

Type	Start	End	Confidence
Cytoplasmic	1	19	0.93
Transmembrane Helix	20	39	0.83
Non-Cytoplasmic	40	70	0.70
Transmembrane Helix	71	90	0.90
Cytoplasmic	91	110	0.88
Transmembrane Helix	111	132	0.94
Non-Cytoplasmic	133	149	0.91