YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47522388
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVVSVLGL VMFSVALLIL SLISYVSIKK DFIFTAPKYA NAGGPRMYMF HAGFRSQLAM  60
   61 KFLDPAFTSL NTALNENLQE SSNWRFNRSA YAELNKEIAQ HIDVPHNFTL TKNSVRVGQL 120
  121 MHYDYSSHKY VFSIGENLRS LLPDASPVLN KRYNTCAVVG NSGILTGSRC GPEIDKYDFV 180
  181 FRCNFAPTEV FRRDVGRRTN LTTFNPSILE KYYNNLLTIQ DRNNFFLSLK KLDGAILWIP 240
  241 AFFFHTSATV TRTLVDFFVE HKGQLKVQLA WPGNIMQYVN KYWKTKQLSP KRLSTGILMF 300
  301 TLASSLCEQV HLYGFWPFGW DPNTGKELPY HYYDKKGTKF TTKWQESHQL PTEFKLLFKM 360
  361 HADGVLKLSL SHCA

Type	Start	End	Confidence
Signal Peptide	1	24	0.69
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	374	0.85