YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|206224
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTICGKGLSA TVTGGQKGRG SRGQHQAHSL ERVCHCLGKW LGHPDKFVGI TYALTVVWLL  60
   61 VFACSAVPVY IYFNTWTTCQ SIAFPSKTSA SIGSLCADAR MYGVLPWNAF PGKVCGSNLL 120
  121 SICKTAEFQM TFHLFIAAFV GAAATLVSLL TFMIAATYNF AVLKLMGRGT KF

Type	Start	End	Confidence
Cytoplasmic	1	47	0.88
Transmembrane Helix	48	72	0.88
Non-Cytoplasmic	73	134	0.84
Transmembrane Helix	135	161	0.86
Cytoplasmic	162	172	0.82