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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47232495
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITHGCYTRT RHKHKLKKTF VMLSAGLGLF FYVNQNSFAN GENYFKLSSD SKLLTQNAAQ  60
   61 NRLFYTLKTG ETVADLSKSQ NINLSTIWSL NKHLYSSESE MMKAAPGQQI ILPLKKLPVE 120
  121 YSALPHLGSA PVVAAGGVAG HTNKMAKMSP DMTKSNMTDD KALNYAAQQA ASLGSQLQSR 180
  181 SLNGDYAKDA ALGMAGNQAS SQLQAWLQHY GTAEVNLQSG NNFDGSSLDF LLPFYDTEEM 240
  241 LAFGQVGARY IDSRFTANLG AGQRFFLSEN MLGYNVFIDQ DFSGDNTRLG IGGEYWRDYF 300
  301 KSSVNGYFRM SGWHESYNKK DYDERPVNGF DIRFNGYLPS YPALGAKLMY EQYYGDNVAL 360
  361 FNADKLQSNP GAATVGVNYT PVPLVTMGVD YRHGTGNEND LLYSMQFRYQ FDKPWSQQIE 420
  421 PQYVNELRTL SGSRYDLVQR NNNIILEYKK QDILSLSIPH DINGTEHSTQ KIQLNVKSKY 480
  481 GLDRIVWDDS ALRSQGGQIQ HSGSQSAQDY QAILPAYVQG GSNIYKVTAR AYDRNGNSSN 540
  541 NVQLTITVLS NGQVVGQVGV TDFTADKTSA KADNADTITY TATVKKNGVA QANVPVSFDI 600
  601 VSGDATLSAR SVTTNSSGKA TVTLKSSKPG QVVVSAKTAE MTSALNASAV IFVDQTKASI 660
  661 TEIKADKTTA VANGKDAITY TVKVMKNGQP LSGEEVTFTK TLGTLSKSIE KTDANGYAKV 720
  721 TLTSVTQGKS LVSARVSDVA VDVKAPEVEF FTQLTIDNSN IEIVGTGVKG TLPTVWLQYG 780
  781 QVKLKASGGN GRYTWRSANT AIASVDASSG QITLKDKGTT TITVVSGDNQ TATYTIATPS 840
  841 SMIVSNINSR MTYSEAMSSC QSLRGRLPSS QSELADVFDT WGAANKYEYY KTSTSIISWI 900
  901 KQTDDDVKKG VASTYDLVKR NPLTSSVKTD ARNAYATCVK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle