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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4240163
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLRGCGAAGR GGRAGPGRAP LTAMLTFFLV SGGSLWLFVE FVLSLLEKMQ TQEILRILRL  60
   61 PELGDLGQFF RSLSATTLVS MGALAAILAY WFTHRPKALQ PPCNLLMQSE EVEDSGGARR 120
  121 SVIGSGPQLL THYYDDARTM YQVFRRGLSI SGNGPCLGFR KPKQPYQWLS YQEVADRAEF 180
  181 LGSGLLQHNC KACTDQFIGV FAQNRPEWII VELACYTYSM VVVPLYDTLG PGAIRYIINT 240
  241 ADISTVIVDK PQKAVLLLEH VERKETPGLK LIILMDPFEE ALKERGQKCG VVIKSMQAVE 300
  301 DCGQENHQAP VPPQPDDLSI VCFTSGTTGN PKGAMLTHGN VVADFSGFLK VTEKVIFPRQ 360
  361 DDVLISFLPL AHMFERVIQS VVYCHGGRVG FFQGDIRLLS DDMKALCPTI FPVVPRLLNR 420
  421 MYDKIFSQAN TPLKRWLLEF AAKRKQAEVR SGIIRNDSIW DELFFNKIQA SLGGCVRMIV 480
  481 TGAAPASPTV LGFLRAALGC QVYEGYGQTE CTAGCTFTTP GDWTSGHVGA PLPCNHIKLV 540
  541 DVEELNYWAC KGEGEICVRG PNVFKGYLKD PDRTKEALDS DGWLHTGDIG KWLPAGTLKI 600
  601 IDRKKHIFKL AQGEYVAPEK IENIYIRSQP VAQIYVHGDS LKAFLVGIVV PDPEVMPSWA 660
  661 QKRGIEGTYA DLCTNKDLKK AILEDMVRLG KESGLHSFEQ VKAIHIHSDM FSVQNGLLTP 720
  721 TLKAKRPELR EYFKKQIEEL YSISM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle