YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41581272
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMLAQELE GYYAQRELAL KMARLPAMFG GAMVAGFAYI QYQATQAGNY AIDIFKRAGE  60
   61 TAGGVASGFF QELQNVAEQT HRGWQKTTED IEVPEWLQKI LRLDEGSHDG SGGSSGGGSP 120
  121 KESRAGAGVV GVAAGSAFGY SQSDEDEVRH ARQIAEDDQM MLLTRKMIEI RNILQTVGQS 180
  181 GTLTLPSIVV IGSQSSGKSS VLEAIVGHEF LPKGTNMVTR RPIELTLVNT PNAQSEYGEF 240
  241 PALGLGKITD FSQIQRTLTD LNLAVPERDC VSDDPIKLTI YSPNVPDLSL IDLPGYIQVA 300
  301 GKDQPPELKQ KIADLCDKYI QPPNVILAIS AADVDLANST ALRASRRVDP RGERTIGVIT 360
  361 KMDLVDPERG FSILSDQKYP LRLGYVGVVS RVPQTTALFS RGSGNITSAI LKNENAYFSA 420
  421 HPSEFGPQSG VSVGVSTLRG KLMHVLEQTM AASLAGTRDA ISQELEEATY EFKVQYNDRP 480
  481 LSAESYLAES LDSFKHSFKA FAESFGRPQV REMLKNELDQ RVMDILAQRY WNKPIEDLTA 540
  541 SMPELDPLSD LPKADADSQY WRRKLDASTS SLTKLGIGRL ATTVVANAIQ NQVDRLLANS 600
  601 TFANHPYAQK QIMEACTSIL NDRFFSTSDQ VENCIKPYKF EIEVEDPEWA KGRENVSRVL 660
  661 KEELKACDAA YRRVEEAVGK KKFKDVMAFV DKVRKGEVVL EGDGAAGAGG FSSALLNKGM 720
  721 LCLSQLTVPA RVLTKRTGRE GVFLRDRADL IKMRLLAIRS KQCASKKNKY YCPEVFLDVV 780
  781 ADKLTSTAVL FLNVELLSEF YYNFPRELDM RIGRHLSDAE VERFAREDPR VRKHLDVIRK 840
  841 KELLELALEK IESIRQLDGR SKQRNADRPL AAKEQRSRGW NLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle