YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41581261
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTEVEDE HFAQEKPMAT KNNVLLATDD EDEDYTDTES EISVESDLDV EGETLYERVA  60
   61 ALKDIVPPST RRQISSTVST LTSFTKSSIS FSGKALWILS TSAFLLGVPW ALAYAEEEQY 120
  121 VQMEREQGMI KGANEDLFGP FENPWWCENS YLATFSAKKA RHTRIEFYLC ICCKTKRDFG 180
  181 KVLELVFSSH IPFFFWFAYW AGAIIEKFLF ASLPPRFKSS FPFPCCIQAF GLSPPRFPDV 240
  241 FLGSICTCIT TYLCSFRVMS IPLCSLMHIL KQLLAIQPDL RVLGIIAETK AKLTQALSRV 300
  301 QDGSLYVKAP HRVCRRLC

Type	Start	End	Confidence
Cytoplasmic	1	94	0.78
Transmembrane Helix	95	114	0.77
Non-Cytoplasmic	115	189	0.64
Transmembrane Helix	190	211	0.76
Cytoplasmic	212	318	0.57