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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7242961
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQVAAINPNH PLAQMPLPPS MKNCIQLAAC EATELLPMIP DLPADLFTSC LTTPIKIALR  60
   61 WFCMQKCVSL VPGVTLDLIE KIPGRLNDRR TPLGELNWIF TAITDTIAWN VLPRDLFQKL 120
  121 FRQDLLVASL FRNFLLAERI MRSYNCTPVS SPRLPPTYMH AMWQAWDLAV DICLSQLPTI 180
  181 IEEGTAFRHS PFFAEQLTAF QVWLTMGVEN RNPPEQLPIV LQVLLSQVHR LRALDLLGRF 240
  241 LDLGPWAVSL ALSVGIFPYV LKLLQSSARE LRPLLVFIWA KILAVDSSCQ ADLVKDNGHK 300
  301 YFLSVLADPY MPAEHRTMTA FILAVIVNSY HTGQEACLQG NLIAICLEQL NDPHPLLRQW 360
  361 VAICLGRIWQ NFDSARWCGV RDSAHEKLYS LLSDPIPEVR CAAVFALGTF VGNSAERTDH 420
  421 STTIDHNVAM MLAQLVSDGS PMVRKELVVA LSHLVVQYES NFCTVALQFI EEEKNYALPS 480
  481 PATTEGGSLT PVRDSPCTPR LRSVSSYGNI RAVATARSLN KSLQNLSLTE ESGGAVAFSP 540
  541 GNLSTSSSAS STLGSPENEE HILSFETIDK MRRASSYSSL NSLIGVSFNS VYTQIWRVLL 600
  601 HLAADPYPEV SDVAMKVLNS IAYKATVNAR PQRVLDTSSL TQSAPASPTN KGVHIHQAGG 660
  661 SPPASSTSSS SLTNDVAKQP VSRDLPSGRP GTTGPAGAQY TPHSHQFPRT RKMFDKGPEQ 720
  721 TADDADDAAG HKSFISATVQ TGFCDWSARY FAQPVMKIPE EHDLESQIRK EREWRFLRNS 780
  781 RVRRQAQQVI QKGITRLDDQ IFLNRNPGVP SVVKFHPFTP CIAVADKDSI CFWDWEKGEK 840
  841 LDYFHNGNPR YTRVTAMEYL NGQDCSLLLT ATDDGAIRVW KNFADLEKNP EMVTAWQGLS 900
  901 DMLPTTRGAG MVVDWEQETG LLMSSGDVRI VRIWDTDREM KVQDIPTGAD SCVTSLSCDS 960
  961 HRSLIVAGLG DGSIRVYDRR MALSECRVMT YREHTAWVVK ASLQKRPDGH IVSVSVNGDV1020
 1021 RIFDPRMPES VNVLQIVKGL TALDIHPQAD LIACGSVNQF TAIYNSSGEL INNIKYYDGF1080
 1081 MGQRVGAISC LAFHPHWPHL AVGSNDYYIS VYSVEKRVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle