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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12697963
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFTMHRKKVD NRIRILIENG VAERQRSLFV VVGDRGKDQV VILHHMLSKA TVKARPSVLW  60
   61 CYKKELGFSS HRKKRMRQLQ KKIKNGTLNI KQDDPFELFI AATNIRYCYY NETHKILGNT 120
  121 FGMCVLQDFE ALTPNLLART VETVEGGGLV VILLRTMNSL KQLYTVTMDV HSRYRTEAHQ 180
  181 DVVGRFNERF ILSLASCKKC LVIDDQLNIL PISSHVATME ALPPQTPDES LGPSDLELRE 240
  241 LKESLQDTQP VGVLVDCCKT LDQAKAVLKF IEGISEKTLR STVALTAARG RGKSAALGLA 300
  301 IAGAVAFGYS NIFVTSPSPD NLHTLFEFVF KGFDALQYQE HLDYEIIQSL NPEFNKAVIR 360
  361 VNVFREHRQT IQYIHPADAV KLGQAELVVI DEAAAIPLPL VKSLLGPYLV FMASTINGYE 420
  421 GTGRSLSLKL IQQLRQQSAQ SQVSTTAENK TTTTARLASA RTLHEVSLQE SIRYAPGDAV 480
  481 EKWLNDLLCL DCLNITRIVS GCPLPEACEL YYVNRDTLFC YHKASEVFLQ RLMALYVASH 540
  541 YKNSPNDLQM LSDAPAHHLF CLLPPVPPTQ NALPEVLAVI QVCLEGEISR QSILNSLSRG 600
  601 KKASGDLIPW TVSEQFQDPD FGGLSGGRVV RIAVHPDYQG MGYGSRALQL LQMYYEGRFP 660
  661 CLEEKVLETP QEIHTVSSEA VSLLEEVITP RKDLPPLLLK LNERPAERLD YLGVSYGLTP 720
  721 RLLKFWKRAG FVPVYLRQTP NDLTGEHSCI MLKTLTDEDE ADQGGWLAAF WKDFRRRFLA 780
  781 LLSYQFSTFS PSLALNIIQN RNMGKPAQPA LSREELEALF LPYDLKRLEM YSRNMVDYHL 840
  841 IMDMIPAISR IYFLNQLGDL ALSAAQSALL LGIGLQHKSV DQLEKEIELP SGQLMGLFNR 900
  901 IIRKVVKLFN EVQEKAIEEQ MVAAKDVVME PTMKTLSDDL DEAAKEFQEK HKKEVGKLKS 960
  961 MDLSEYIIRG DDEEWNEVLN KAGPNASIIS LKSDKKRKLE AKQEPKQSKK LKNRETKNKK1020
 1021 DMKLKRKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle