YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26378096
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPTAGDME TLYRVPFLVL ECPNLKLKKP PWVHMPSAMT VYALVVVSYF LITGGIIYDV  60
   61 IVEPPSVGSM TDEHGHQRPV AFLAYRVNGQ YIMEGLASSF LFTMGGLGFI ILDRSNAPNI 120
  121 PKLNRFLLLF IGFVCVLLSF FMARVFMRMK LPGYLMG

Type	Start	End	Confidence
Cytoplasmic	1	37	0.95
Transmembrane Helix	38	61	0.87
Non-Cytoplasmic	62	90	0.96
Transmembrane Helix	91	112	0.92
Cytoplasmic	113	125	0.84
Transmembrane Helix	126	147	0.93
Non-Cytoplasmic	148	157	0.96