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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11761329
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIKQAKRK QKPQLIHWRL YVVVAFVCLL FTSLIGRAAY IQILEPEKLR HESDMRSLRT  60
   61 TSREVQRGLI TDRNGEMLAI SVPVKAVYAD PKVVNDKNGF ADMRLWQALA DVLHEPEDKI 120
  121 LKRVQDHPKR RFTYLKRQVT PAVADYIKKL KLPGIYLKAE SRRYYPTSEI IAQLIGITNI 180
  181 DDVGIEGIEN TYNDWLTGTP SKQKVRKSRD GHVVERLDMV QEGESPNDLV LSIDQRIQQL 240
  241 AYREIKRVTE INKATSASIV VIDVNTGEVL AMANTPSYNP NSRDHLQSYR MRNRALTDAY 300
  301 EPGSTIKPFA VAAALEAGTI NKNQIFKTSP GRIRIGGKIV RDGRNYGDLS LGEVLVHSSN 360
  361 VGMTQIALSM PVQELLGYYQ AMGLGNYSGI NLAGESTGLL HDRRRWSEFE RATLSFGYAL 420
  421 TVTPLQIARM YAMLGGKGIL YPSSILKLKK KPEGVQVISP EVAQHVMEML IGVTEPGGTA 480
  481 TKAHIEGYPV AGKTGTARKA VAGGYGEDYV AMFAGVAPVH NPRLAIAVVV NEPKGDKYYG 540
  541 GDVAGPAFAK VMSGALQMLN VEPITSKEKV RLVSHVKRTE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle