YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226262, gi\|170098
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALQNPVAL QSRTTTAVAA LSTSSTTSPP KPFSLSFSSS TATFNPLRLK ILTASKLTAK  60
   61 PRGGALGTRM VDSTASRYAS ALADVADVTG TLEATNSDVE KLIRIFSEEP VYYFFANPVI 120
  121 SIDNKRSVLD EIITTSGLQP HTANFINILI DSERINLVKE ILNEFEDVFN KITGTEVAVV 180
  181 TSVVKLENDH LAQIAKGVQK ITGAKNVRIK TVIDPSLVAG FTIRYGNEGS KLVDMSVKKQ 240
  241 LEEIAAQLEM DDVTLAV

Type	Start	End	Confidence
Signal Peptide	1	27	0.73
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	257	0.99