YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CYC_DANRE
Organism: Danio rerio
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYC_DANRE.

Description E-value Query
Range		 Subject
Range
gi|89272026 - gi|89272026|emb|CAJ83237.1| cytochrome c, somatic [Xenopus tropicalis]
 153.0 [0..1] [104..8]
CYC2_XENLA - Cytochrome c, testis-specific OS=Xenopus laevis GN=cyct PE=3 SV=3
 152.0 [0..1] [104..1]
gi|229351 - gi|229351|prf||711086A cytochrome c
 152.0 [0..2] [104..1]
CYC_SHEEP - Cytochrome c OS=Ovis aries GN=CYCS PE=1 SV=2
CYC_BOVIN - Cytochrome c OS=Bos taurus GN=CYCS PE=1 SV=2
CYC_PIG - Cytochrome c OS=Sus scrofa GN=CYCS PE=1 SV=2
 151.0 [0..1] [104..1]
CYC_SCHGR - (P00040) Cytochrome c
 150.0 [0..2] [103..5]
CYC_CYPCA - (P00026) Cytochrome c iso-1/iso-2
 150.0 [0..2] [104..1]
CYC2_RAT - Cytochrome c, testis-specific OS=Rattus norvegicus GN=Cyct PE=2 SV=2
 150.0 [0..1] [104..1]
CYC2_MOUSE - Cytochrome c, testis-specific OS=Mus musculus GN=Cyct PE=1 SV=3
 150.0 [0..1] [104..1]

Back

Predicted Domain #1
Region A:
Residues: [1-104] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDVEKGKKV FVQKCAQCHT VENGGKHKVG PNLWGLFGRK TGQAEGFSYT DANKSKGIVW  60
   61 GEDTLMEYLE NPKKYIPGTK MIFAGIKKKG ERADLIAYLK SATS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.045757
Match: 2aiuA
Description: No description for 2aiuA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle