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View Structure Prediction Details

Protein: HSP1_RAT
Organism: Rattus norvegicus
Length: 51 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for HSP1_RAT.

Predicted Domain #1
Region A:
Residues: [1-51]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARYRCCRSK SRSRCRRRRR RCRRRRRRCC RRRRRRCCRR RRSYTFRCKR Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.506 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.403 a.4.1 Homeodomain-like
View Download 0.403 a.4.1 Homeodomain-like
View Download 0.400 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.341 a.32.1 Transcription factor IIA (TFIIA), alpha-helical domain
View Download 0.337 a.22.1 Histone-fold
View Download 0.337 a.22.1 Histone-fold
View Download 0.320 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.282 a.4.1 Homeodomain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle