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View Structure Prediction Details

Protein: gi|8809770, gi|2...
Organism: Mus musculus
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8809770, gi|2....

Description E-value Query
Range
Subject
Range
LY6I_MOUSE - Lymphocyte antigen 6I OS=Mus musculus GN=Ly6i PE=2 SV=1
191.0 [0..1] [134..1]
gi|149066197, gi... - gi|9910398|ref|NP_064488.1| Ly6-C antigen [Rattus norvegicus], pir||D45835 Ly6 homolog RK3 precursor...
171.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSHEIKSC VLILLVTLLC AERAQGLECY QCYGVPFETS CPSFTCPYPD GFCVAQEEEF  60
   61 IANSQRKRVK SRSCHPFCPD EIEKKFILDP NTKMNISCCQ EDLCNAAVPT GGSSWTTAGV 120
  121 LLFSLGSVLL QTLM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.29
Match: 1rewC
Description: Structural refinement of the complex of bone morphogenetic protein 2 and its type IA receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.392895070238082 bayes_pls_golite062009
protein binding 0.0406255481464208 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle