YRC Public Data Repository - Protein Structure Prediction

Protein:	KAD2_MOUSE
Organism:	Mus musculus
Length:	232 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAD2_MOUSE.

Description	E-value	Query Range	Subject Range
KAD_CARHZ - Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=a...	225.0	[0..16]	[229..1]
gi\|7434595, gi\|1... - gi\|7524346\|ref\|NP_037543.1\| adenylate kinase 2 isoform b [Homo sapiens], pir\|\|JC5893 adenylate kinas... gi\|109001656 - gi\|109001656\|ref\|XP_001106031.1\| PREDICTED: adenylate kinase 2 isoform 2 [Macaca mulatta] gi\|114555423 - gi\|114555423\|ref\|XP_513289.2\| PREDICTED: adenylate kinase 2 isoform 4 [Pan troglodytes]	223.0	[0..1]	[232..1]
gi\|33304113, gi\|... - gi\|60654271\|gb\|AAX29828.1\| adenylate kinase 2 [synthetic construct], gi\|33304113\|gb\|AAQ02564.1\| aden...	221.0	[0..1]	[231..1]
gi\|73949913 - gi\|73949913\|ref\|XP_864020.1\| PREDICTED: similar to adenylate kinase 2 isoform b isoform 2 [Canis fam...	220.0	[0..1]	[232..1]
gi\|38511598, gi\|... - gi\|77020256\|ref\|NP_001029139.1\| adenylate kinase 2 isoform b [Rattus norvegicus], gi\|38511598\|gb\|AAH...	220.0	[0..1]	[232..1]
gi\|169347079, gi... - gi\|169347079\|ref\|ZP_02866021.1\| adenylate kinase [Clostridium perfringens C str. JGS1495], gi\|169296... gi\|182626945, gi... - gi\|182626945\|ref\|ZP_02954678.1\| adenylate kinase [Clostridium perfringens D str. JGS1721], gi\|177907... KAD_CLOP1 - Adenylate kinase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / N... gi\|170663256, gi... - gi\|170663256\|gb\|EDT15939.1\| adenylate kinase [Clostridium perfringens E str. JGS1987], gi\|168205213\|... KAD_CLOPS - Adenylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=adk PE=3 SV=1 gi\|168211884, gi... - gi\|170710173\|gb\|EDT22355.1\| adenylate kinase [Clostridium perfringens B str. ATCC 3626], gi\|16821188... gi\|168215197, gi... - gi\|170713401\|gb\|EDT25583.1\| adenylate kinase [Clostridium perfringens CPE str. F4969], gi\|168215197\|... gi\|168216652, gi... - gi\|182381130\|gb\|EDT78609.1\| adenylate kinase [Clostridium perfringens NCTC 8239], gi\|168216652\|ref\|Z...	219.0	[0..16]	[229..1]
gi\|74207572 - gi\|74207572\|dbj\|BAE40035.1\| unnamed protein product [Mus musculus]	219.0	[0..1]	[232..1]
KAD_CLOPE - Adenylate kinase OS=Clostridium perfringens GN=adk PE=3 SV=1 KAD_CLOPE - Adenylate kinase OS=Clostridium perfringens (strain 13 / Type A) GN=adk PE=3 SV=1	218.0	[0..15]	[229..2]

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Predicted Domain #1

Region A:
Residues: [1-232]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPNVLASEP EIPKGIRAVL LGPPGAGKGT QAPKLAENFC VCHLATGDML RAMVASGSEL  60
   61 GKKLKATMDA GKLVSDEMVV ELIEKNLETP SCKNGFLLDG FPRTVRQAEM LDDLMEKRKE 120
  121 KLDSVIEFSI QDSLLIRRIT GRLIHPKSGR SYHEEFNPPK EPMKDDITGE PLIRRSDDNE 180
  181 KALKTRLEAY HTQTTPLVEY YRKRGIHCAI DASQTPDIVF ASILAAFSKA TS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.0
Match:	2c9yA
Description:	Structure of human adenylate kinase 2
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits