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View Structure Prediction Details

Protein: NRBP2_MOUSE
Organism: Mus musculus
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRBP2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|109480893, gi... - gi|201860270|ref|NP_001128479.1| nuclear receptor binding protein 2 [Rattus norvegicus], gi|10948232...
304.0 [0..1] [258..234]
gi|21740358 - gi|21740358|emb|CAD39186.1| hypothetical protein [Homo sapiens]
299.0 [0..1] [258..37]
gi|61354640 - gi|61354640|gb|AAX41032.1| hypothetical protein LOC340371 [synthetic construct]
297.0 [0..1] [258..1]
gi|73974850 - gi|73974850|ref|XP_851919.1| PREDICTED: similar to nuclear receptor binding protein [Canis familiari...
294.0 [0..1] [252..243]
gi|114622315 - gi|114622315|ref|XP_001155260.1| PREDICTED: similar to MADML [Pan troglodytes]
294.0 [0..1] [258..257]
OXSR1_MOUSE - Serine/threonine-protein kinase OSR1 OS=Mus musculus GN=Oxsr1 PE=1 SV=1
255.0 [0..1] [248..215]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCALEMAVLE IQANGDTRVT EEAIARARHS LSDPNMREFI LSCLARDPAR RPSAHNLLFH  60
   61 RVLFEVHSLK LLAAHCFIQH QYLMPENVVE EKTKAMDLHA VLAEMPQPHG PPMQWRYSEV 120
  121 SFLELDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2gcdA
Description: No description for 2gcdA was found.

Predicted Domain #2
Region A:
Residues: [128-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLEDVRNGIY PLMNFAAARP LGLPRVLAPP PEEAQKAKTP TPEPFDSETR KVVQMQCNLE  60
   61 RSEDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARWHLTLLLV LEDRLHRQLT YDLLPTDSAQ DLAAELVHYG FLHEDDRTKL AAFLETTFLK  60
   61 YRGTQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2v3sA
Description: No description for 2v3sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle