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View Structure Prediction Details

Protein: CENPP_MOUSE
Organism: Mus musculus
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CENPP_MOUSE.

Description E-value Query
Range
Subject
Range
gi|12839220 - gi|12839220|dbj|BAB24472.1| unnamed protein product [Mus musculus]
495.0 [0..27] [286..53]
CENPP - centromere protein P
442.0 [0..1] [286..1]
CENPP_CHICK - Centromere protein P OS=Gallus gallus GN=CENPP PE=1 SV=1
221.0 [0..7] [285..12]
gi|76625089 - gi|76625089|ref|XP_587065.2| PREDICTED: hypothetical protein XP_587065 [Bos taurus]
190.0 [0..1] [156..58]
gi|57525887, gi|... - gi|57525887|ref|NP_001003555.1| centromere protein P [Danio rerio], gi|50418539|gb|AAH78335.1| Centr...
179.0 [0..25] [283..42]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSETRELRA LEAEVAALQR ECRMLQNAGE KASGAWKSFQ KISQSDSEEW ESLKDLRSQL  60
   61 EHLRSEHSFL SKLTGFNIRN YSKMEDIVNT EETEKDTKKV LQKHRLSGNC NMVTFQLEFE 120
  121 VLEMETKEKK SSIITDLSII MEPTEYSELS EFASRAEEKR DLLMFFRSLH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [171-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFVEWCEYRE NTFKHFKEKY PDTVYLLEGT CSHCMEIRST RQPGFELVIV WKIQIDEEGM  60
   61 VFPKLDLLTK VPERALGLDK NRVIETAPLS FRSLLGVLGI EAALDSLIRL FSGDNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle