| Protein: | CG30340-PA |
| Organism: | Drosophila melanogaster |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30340-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..3] | [394..96] |
|
Region A: Residues: [1-396] |
1 11 21 31 41 51
| | | | | |
1 MASVSSSDDF DFGKWDFPAE RIWLHKPNGE ITWKICTFLP LIAFGLYGNF SMVYVIATNR 60
61 SLRSPTNLII ANMAVADLLT LAICPAMFMV NDFYQNYQLG CVGCKLEGFL VVVFLITAVL 120
121 NLSVVSYDRL TAIVLPMETR LTIRGVQIVV VCTWVSGILL ASPLAFYRSY RVRVWKNFTE 180
181 RYCKENTSVL PKYWYVLITI LVWLPLGIML ICYIAIFYKL DRYEKRVLSR ENPLTVSYKR 240
241 SVAKTLFIVV VVFAALRLPF TILVVLREKY FGEDVSVSSG MQLFWYISQY LMFLNAAVNP 300
301 LIYGFNNENF RRAYYQISWV RRWRDATQMK KFSRSPDHCC YCAFMKNGKR TSEAAQKAGN 360
361 LEKDISKDMS SAQQSAKSTK IVENEFVSEI EADGFI
|
| Detection Method: |  |
| Confidence: | 42.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
