| Protein: | egr-PB |
| Organism: | Drosophila melanogaster |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egr-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..1] | [409..1] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MTAETLKPFI TPTSANDDGF PAKATSTATA QRRTRQLIPL VLGFIGLGLV VAILALTIWQ 60
61 TTRVSHLDKE LKSLKRVVDN LQQRLGINYL DEFDEFQKEY ENALIDYPKK VDGLTDEEDD 120
121 DDGDGLDSIA DDEDDDVSYS SVDDVGADYE DYTDMLNKLN NAHTGTTPTS ETTAEGEGET 180
181 DSASSAS
|
| Detection Method: |  |
| Confidence: | 1.15 |
| Match: | 1sg2A |
| Description: | Crystal structure of the periplasmic chaperone Skp |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.55241957936149 | bayes_pls_golite062009 |
| binding | 1.33499069146939 | bayes_pls_golite062009 |
| lipopolysaccharide binding | 0.499187713515374 | bayes_pls_golite062009 |
|
Region A: Residues: [188-409] |
1 11 21 31 41 51
| | | | | |
1 NDDNVFDDFT SYNAHKKKQE RKSRSIADVR NEEQNIQGNH TELQEKSSNE ATSKESPAPL 60
61 HHRRRMHSRH RHLLVRKARS EDSRPAAHFH LSSRRRHQGS MGYHGDMYIG NDNERNSYQG 120
121 HFQTRDGVLT VTNTGLYYVY AQICYNNSHD QNGFIVFQGD TPFLQCLNTV PTNMPHKVHT 180
181 CHTSGLIHLE RNERIHLKDI HNDRNAVLRE GNNRSYFGIF KV
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 1osgA |
| Description: | Soluble part of TALL-1, sTALL-1 (BAFF) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.25413201891408 | bayes_pls_golite062009 |
| receptor binding | 1.87082918048468 | bayes_pls_golite062009 |
| binding | 1.55055236820725 | bayes_pls_golite062009 |
| tumor necrosis factor receptor superfamily binding | 1.47525106874221 | bayes_pls_golite062009 |
| CD40 receptor binding | 0.275062817872213 | bayes_pls_golite062009 |
