| Protein: | CAP-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
599.0 | [0..1] | [1734..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MPNPIKSAQN SYKNQPGRIE NYTTGHSSVS EKEKKENLEQ SKLSPLYTEG NLSRALAKES 60
61 GYTSDSNLVF RKKEVPVSSP LSPVEQKQAY KSLQAGGEPP LLGFRKPAPE KPREILEEFE 120
121 FI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [123-210] |
1 11 21 31 41 51
| | | | | |
1 QITPTLTKIR VSTKELEEEV EPVRKAATPP PAPPPPPPPP PHQSLATSRD HKPVKMFSQL 60
61 SKNLPSFIPL SKKQQVSQQD DPPPRPPH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [211-492] |
1 11 21 31 41 51
| | | | | |
1 RKSSCTKSTV RVLSSASKSR HEQCFQPPNG TAPGVSTITL RKVATSSCSR REPICRSKSA 60
61 GAVSTLLQTL TATKETRLTR RVQQQQQQSR LRSSSPSRRP ARLLALRHSS RSPVAFGRSI 120
121 SKERSFAEEK KRLENTLPAN RTNFEASTNI LRDPSLKSPQ EVREAVRSYA TSRSKSLPRL 180
181 RHTTVSTTTR QTMCFPQVRP QTLLDCGTRS LRKSSSKTGK GQEKNGSNDS LPRSNSTFSI 240
241 DSMVRQEIVP IAPPKTYVGK SRGSLSKALV PLQNSRSEGH VP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [493-662] |
1 11 21 31 41 51
| | | | | |
1 RKRQSGKSTT KPPPPVTVHS YSESVREKTN FWNEYNAKQA MSLPQEYKFC PEDVCDFESH 60
61 TIQQPCIEDL VWKYEGKEQR PPKQVTVTDI ARPQSPQLSQ ERRFSPTREV RVPQISREVR 120
121 SPSRRRIDSL RSKDKEQSLA RASSLSSADD RKRATPAPSN GLYQCGELAH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [663-1401] |
1 11 21 31 41 51
| | | | | |
1 SATSLTHLER HSPSCRYRNN CERFTELNRF YSTLERVGQL ERATSSSSFH PLRKDAELLD 60
61 FDEWRRVRLH ERAEKELQYL VGKLRDDQKQ RDLHFRSKDV DSIKWRQEAD QSLIAKKKSV 120
121 EDLRENFEQL NLLRQQQQLQ SEPVHRHWRR NTVADLACSL EHQALAEPEM ERHLDNDLVS 180
181 TLSKDQIKKI TQQLNEIYSG NRHAPAVEEQ YVVTVEKGSR PNGLKVRCNS TISKDQLLGP 240
241 VQRKRDEQHS NQTLPRSTRS QSPVVVARET RGAIAAKNAE LTLTKPPDVP PRPKPTPSQE 300
301 IKSKPPPKAE PKVEAREPAE DISQKIQYFE DRQFDEPPKT IYHAREDSSP DEAEVMRLIN 360
361 QNMQERQRAR QLHHHQELSN SLTDLSGVFG ERPAARVNFH LHSPPDRPPD DTELISFGNG 420
421 SPDHGDGSLE LYSDSYYRSR SLSPQSQVSA CSSSYLQRVY TGEVRKMRQH FESIQQSGEQ 480
481 SREPSNERRD FFGLSSLRRA RSDPEMSAGS KDAPDTVTEA VSKEDVPRLT HKFELRAATP 540
541 SPERGRKRLR SAQDRLMPHI DIISKTAALK RELPIPVRSS PTRSVSSNSH CFERLRMRYE 600
601 SPEPQTQSYL STSHPDMRDV HDISPHLSAD WVAHKHPEPT KPKDLPKKPQ RVVRASSTSP 660
661 LRPARSQNHQ LSSRLTSCMK DIFANQKFDP NKHRPKARYV PDGAENGNQK SKDNGTLERL 720
721 KKTAMVTFKD VNIHFKTPI
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1j7nA |
| Description: | Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 0.397873089142268 | bayes_pls_golite062009 |
|
Region A: Residues: [1402-1474] |
1 11 21 31 41 51
| | | | | |
1 RHEQRQNLSE EELAIRQAEH MQKLYHEERR RKYLQELQDM NSRRHTDNFT PSQKSPIALN 60
61 RYDDFPTDVT LKS
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
|
Region A: Residues: [1475-1734] |
1 11 21 31 41 51
| | | | | |
1 LVGPKTVARA LFNFQGQTSK ELSFRKGDTI YIRRQIDANW YEGEHNAMIG LLPASYVEIV 60
61 SRDGARTPSK RPSEGQARAK YNFQAQSGIE LSLNKGELVT LTRRVDGNWF EGKIANRKGI 120
121 FPCSYVEVLT DIGAEDIAAR TTTVITSQST TNLRPNLDVL RTNINNEFNT LTQNGAQPPN 180
181 GILKETRTLH KTDALHVDTS SEPLAYRALY KYRPQNSDEL ELLEGDVVHV LEKCDDGWFV 240
241 GTSQRTGCFG TFPGNYVERA
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1griA |
| Description: | Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains; Growth factor receptor-bound protein 2 (GRB2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.07557226125735 | bayes_pls_golite062009 |
| protein binding | 0.974282259959803 | bayes_pls_golite062009 |
