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View Structure Prediction Details

Protein: gi|45445693, gi|...
Organism: Drosophila melanogaster
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45445693, gi|....

Description E-value Query
Range
Subject
Range
gi|91083841 - gi|91083841|ref|XP_973820.1| PREDICTED: similar to CG30042-PA [Tribolium castaneum]
178.0 [0..3] [229..2]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKALVITTL VVAQAAKLDN KYLPPPASAA SAGGSPGAGL QGPGGGFGGG GGFGGGGAGG  60
   61 GYGGGGGGGP AGGFGGGPGG GGAGGFGGGN NGLGGFANGR PIAPGGGGGG GGAPAPRPSP 120
  121 SGGAPPTSGP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIPILSFVNE NDGDGNYRFS YETGNGIKAQ EEGTVKNKGS ENEIPSVMGS YSYTNPEGEL  60
   61 VEIMYTADEN GFVPSGNALP TPPPIPEAIA KSLAAQGISI LPGGGYSGGP GGQGKFLQNK 120
  121 SMD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.721246
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle