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View Structure Prediction Details

Protein: Obp56g-PB
Organism: Drosophila melanogaster
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp56g-PB.

Description E-value Query
Range
Subject
Range
gi|48994196 - gi|48994196|emb|CAG26914.1| putative odorant-binding protein OBPjj11 [Anopheles gambiae]
gi|118792242, gi... - gi|118792242|ref|XP_551868.2| AGAP012322-PA [Anopheles gambiae str. PEST], gi|116116807|gb|EAL38696....
115.0 [0..1] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRATFALTLL LGCLSGILAQ QANIDSSVSK ELVTDCLKEN GVTPQDLADL QSGKVKAEDA  60
   61 KDNVKCSSQC ILVKSGFMDS TGKLLTDKIK SYYANSNFKD VIEKDLDRCS AVKGANACDT 120
  121 AFKILSCFQA AN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 2erbA
Description: AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle